Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488101_108217 | Not Available | Negative | 3816406 - 3816819 | 15330.9 |
| hypothetical protein | SAMN04488101_108218 | Not Available | Negative | 3816821 - 3817114 | 10927.7 |
| hypothetical protein | SAMN04488101_108219 | Not Available | Negative | 3817107 - 3817418 | 11543.5 |
| cytochrome c oxidase cbb3-type subunit 2 | SAMN04488101_108220 | Not Available | Negative | 3817418 - 3818431 | 37154.7 |
| cytochrome c oxidase cbb3-type subunit 1 | SAMN04488101_108221 | Not Available | Negative | 3818443 - 3820506 | 77389.8 |
| nitric oxide dioxygenase | SAMN04488101_108222 | Not Available | Negative | 3820581 - 3821792 | 45141.1 |
| transcriptional regulator, badm/rrf2 family | SAMN04488101_108223 | Not Available | Negative | 3821851 - 3822288 | 15949.3 |
| protein of unknown function | SAMN04488101_108224 | Not Available | Negative | 3822610 - 3822954 | 13222.4 |
| hypothetical protein | SAMN04488101_108225 | Not Available | Negative | 3822939 - 3823166 | 8799.28 |
| orf6n domain-containing protein | SAMN04488101_108226 | Not Available | Positive | 3823716 - 3824024 | 12073.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
