Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488101_108207 | Not Available | Negative | 3809175 - 3809567 | 14884.4 |
| hypothetical protein | SAMN04488101_108208 | Not Available | Negative | 3809775 - 3810230 | 17228.1 |
| crp/fnr family transcriptional regulator, anaerobic regulatory protein | SAMN04488101_108209 | Not Available | Negative | 3810868 - 3811560 | 26161.8 |
| h+/cl-antiporter clca | SAMN04488101_108210 | Not Available | Positive | 3811782 - 3813524 | 62227.9 |
| hypothetical protein | SAMN04488101_108211 | Not Available | Negative | 3813848 - 3814162 | 11644.5 |
| uracil-dna glycosylase, family 4 | SAMN04488101_108212 | Not Available | Negative | 3814207 - 3814776 | 21840.5 |
| ferredoxin, 2fe-2s | SAMN04488101_108213 | Not Available | Negative | 3814785 - 3815132 | 13025.0 |
| hemerythrin hhe cation binding domain-containing protein | SAMN04488101_108214 | Not Available | Negative | 3815089 - 3815571 | 19336.9 |
| hemoglobin | SAMN04488101_108215 | Not Available | Negative | 3815614 - 3816051 | 16813.2 |
| hemoglobin | SAMN04488101_108216 | Not Available | Negative | 3816023 - 3816409 | 14990.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
