Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metal-sulfur cluster biosynthetic enzyme | SAMN04488101_108197 | Not Available | Negative | 3798680 - 3799015 | 12639.6 |
| hypothetical protein | SAMN04488101_108198 | Not Available | Negative | 3799002 - 3800294 | 49074.8 |
| uncharacterized conserved protein | SAMN04488101_108199 | Not Available | Negative | 3800291 - 3801106 | 31133.4 |
| pyruvate formate lyase activating enzyme | SAMN04488101_108200 | Not Available | Negative | 3801148 - 3801828 | 25850.9 |
| regulator of cell morphogenesis and no signaling | SAMN04488101_108201 | Not Available | Negative | 3801877 - 3802605 | 27888.1 |
| nitric oxide reductase, norz apoprotein | SAMN04488101_108202 | Not Available | Negative | 3802635 - 3804869 | 84804.5 |
| azurin | SAMN04488101_108203 | Not Available | Negative | 3804897 - 3805427 | 18882.5 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN04488101_108204 | Not Available | Negative | 3805554 - 3806150 | 22753.8 |
| iron complex outermembrane recepter protein | SAMN04488101_108205 | Not Available | Negative | 3806173 - 3808194 | 75778.7 |
| ytka-like | SAMN04488101_108206 | Not Available | Negative | 3808199 - 3809017 | 30558.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
