Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susd family protein | SAMN04488101_108157 | Not Available | Positive | 3759225 - 3760610 | 53488.4 |
| hypothetical protein | SAMN04488101_108158 | Not Available | Negative | 3760895 - 3762184 | 50758.4 |
| hypothetical protein | SAMN04488101_108159 | Not Available | Negative | 3762538 - 3762840 | 10792.8 |
| regulatory protein, luxr family | SAMN04488101_108160 | Not Available | Positive | 3763060 - 3763815 | 29318.7 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN04488101_108161 | Not Available | Positive | 3763854 - 3764504 | 25262.4 |
| hypothetical protein | SAMN04488101_108162 | Not Available | Positive | 3764735 - 3765223 | 18744.4 |
| hypothetical protein | SAMN04488101_108163 | Not Available | Positive | 3765210 - 3765521 | 11181.0 |
| cytochrome oxidase cu insertion factor, sco1/senc/prrc family | SAMN04488101_108164 | Not Available | Negative | 3765607 - 3767091 | 56458.3 |
| susd family protein | SAMN04488101_108165 | Not Available | Negative | 3767101 - 3768489 | 52450.6 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488101_108166 | Not Available | Negative | 3768499 - 3771693 | 119238.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
