Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i restriction enzyme m protein | SAMN04488101_108147 | Not Available | Negative | 3742023 - 3743561 | 57845.6 |
| protein of unknown function | SAMN04488101_108148 | Not Available | Positive | 3743798 - 3744832 | 39614.4 |
| mobilisation protein (mobc) | SAMN04488101_108149 | Not Available | Positive | 3745354 - 3745791 | 16813.1 |
| relaxase/mobilisation nuclease domain-containing protein | SAMN04488101_108150 | Not Available | Positive | 3745746 - 3747038 | 49088.4 |
| type iv secretory pathway, vird4 component, trag/trad family atpase | SAMN04488101_108151 | Not Available | Positive | 3747051 - 3749090 | 76713.5 |
| thiol-disulfide isomerase or thioredoxin | SAMN04488101_108152 | Not Available | Negative | 3749542 - 3751569 | 78054.5 |
| hypothetical protein | SAMN04488101_108153 | Not Available | Negative | 3751873 - 3753207 | 51597.4 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488101_108154 | Not Available | Positive | 3753846 - 3754436 | 22483.6 |
| fecr family protein | SAMN04488101_108155 | Not Available | Positive | 3754595 - 3755722 | 41805.8 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488101_108156 | Not Available | Positive | 3755737 - 3759213 | 131057.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
