Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa thioester hydrolase | SAMN04488101_108137 | Not Available | Positive | 3732058 - 3732465 | 15779.0 |
| membrane protein | SAMN04488101_108138 | Not Available | Positive | 3732475 - 3733470 | 37840.2 |
| Trna-ser | Not Available | Not Available | Positive | 3733565 - 3733651 | Not Available |
| hypothetical protein | SAMN04488101_108140 | Not Available | Negative | 3735134 - 3735340 | 7502.02 |
| Trna-pseudo | Not Available | Not Available | Positive | 3735445 - 3735518 | Not Available |
| type i restriction enzyme, r subunit | SAMN04488101_108142 | Not Available | Negative | 3735585 - 3738809 | 120245.0 |
| hypothetical protein | SAMN04488101_108143 | Not Available | Negative | 3738814 - 3739626 | 31282.8 |
| hypothetical protein | SAMN04488101_108144 | Not Available | Negative | 3739640 - 3740161 | 20503.5 |
| abortive infection c-terminus | SAMN04488101_108145 | Not Available | Negative | 3740214 - 3740867 | 24987.3 |
| type i restriction enzyme, s subunit | SAMN04488101_108146 | Not Available | Negative | 3740867 - 3742030 | 43818.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
