Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphate starvation-inducible protein phoh | SAMN04488101_108117 | Not Available | Negative | 3712984 - 3713949 | 35704.7 |
| hypothetical protein | SAMN04488101_108118 | Not Available | Positive | 3713992 - 3714831 | 31647.6 |
| heme-degrading monooxygenase hmoa | SAMN04488101_108119 | Not Available | Positive | 3714840 - 3715124 | 10848.0 |
| hypothetical protein | SAMN04488101_108120 | Not Available | Positive | 3715163 - 3715681 | 19643.7 |
| hypothetical protein | SAMN04488101_108121 | Not Available | Positive | 3715662 - 3715808 | 5685.37 |
| uncharacterized conserved protein, duf1015 family | SAMN04488101_108122 | Not Available | Negative | 3715801 - 3717015 | 45431.6 |
| d-3-phosphoglycerate dehydrogenase | SAMN04488101_108123 | Not Available | Negative | 3717106 - 3718056 | 33570.6 |
| phosphoserine aminotransferase apoenzyme | SAMN04488101_108124 | Not Available | Negative | 3718067 - 3719131 | 39131.3 |
| outer membrane receptor proteins, mostly fe transport | SAMN04488101_108125 | Not Available | Negative | 3719182 - 3721563 | 89307.5 |
| ribulose-phosphate 3-epimerase | SAMN04488101_108126 | Not Available | Negative | 3721572 - 3722246 | 23938.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
