Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| probable lipoprotein nlpc | SAMN04488101_10896 | Not Available | Negative | 3689831 - 3690331 | 18685.7 |
| dna mismatch repair protein muts | SAMN04488101_10897 | Not Available | Negative | 3690333 - 3692945 | 98028.8 |
| chorismate dehydratase | SAMN04488101_10898 | Not Available | Negative | 3693031 - 3693756 | 27080.5 |
| probable phosphoglycerate mutase | SAMN04488101_10899 | Not Available | Negative | 3693762 - 3694373 | 23108.2 |
| aminodeoxyfutalosine synthase | SAMN04488101_108100 | Not Available | Negative | 3694375 - 3695568 | 46256.9 |
| hypothetical protein | SAMN04488101_108101 | Not Available | Positive | 3695747 - 3696049 | 11208.4 |
| hypothetical protein | SAMN04488101_108102 | Not Available | Negative | 3696292 - 3696777 | 17620.1 |
| cystathionine gamma-synthase | SAMN04488101_108103 | Not Available | Positive | 3696893 - 3698008 | 40234.4 |
| o-acetylhomoserine sulfhydrylase | SAMN04488101_108105 | Not Available | Positive | 3698517 - 3699821 | 46871.2 |
| homoserine o-acetyltransferase | SAMN04488101_108106 | Not Available | Positive | 3699852 - 3700910 | 39245.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
