Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| large subunit ribosomal protein l35 | SAMN04488101_10876 | Not Available | Negative | 3668557 - 3668757 | 7307.21 |
| bacterial translation initiation factor 3 (bif-3) | SAMN04488101_10877 | Not Available | Negative | 3668782 - 3669351 | 21510.4 |
| ser-trna(thr) hydrolase /threonyl-trna synthetase | SAMN04488101_10878 | Not Available | Negative | 3669365 - 3671290 | 72950.0 |
| l-lactate dehydrogenase complex protein llde | SAMN04488101_10879 | Not Available | Negative | 3671549 - 3672286 | 27438.7 |
| mfs transporter, umf1 family | SAMN04488101_10880 | Not Available | Negative | 3672296 - 3673612 | 48847.9 |
| putative auto-transporter adhesin, head gin domain | SAMN04488101_10881 | Not Available | Negative | 3673658 - 3674368 | 25066.8 |
| atp-dependent dna helicase recq | SAMN04488101_10882 | Not Available | Negative | 3674373 - 3676280 | 72422.3 |
| imidazolonepropionase | SAMN04488101_10883 | Not Available | Positive | 3676342 - 3679575 | 119949.0 |
| hypothetical protein | SAMN04488101_10884 | Not Available | Negative | 3679598 - 3680788 | 43792.7 |
| 5-(carboxyamino)imidazole ribonucleotide synthase | SAMN04488101_10885 | Not Available | Positive | 3680845 - 3681984 | 42637.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
