Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| vitamin b12 transporter | SAMN04488101_10865 | Not Available | Negative | 3654620 - 3656488 | 67837.5 |
| beta-lactamase enzyme family protein | SAMN04488101_10867 | Not Available | Positive | 3656883 - 3658091 | 46585.9 |
| polyphosphate:nucleotide phosphotransferase, ppk2 family | SAMN04488101_10868 | Not Available | Negative | 3658142 - 3659062 | 35515.3 |
| penicillin-binding protein 1a | SAMN04488101_10869 | Not Available | Positive | 3659212 - 3661656 | 93112.8 |
| component of the tol biopolymer transport system | SAMN04488101_10870 | Not Available | Positive | 3661677 - 3664856 | 119670.0 |
| putative endonuclease | SAMN04488101_10871 | Not Available | Negative | 3664957 - 3665307 | 13715.7 |
| helix-turn-helix | SAMN04488101_10872 | Not Available | Positive | 3665442 - 3666218 | 29307.0 |
| 8-amino-7-oxononanoate synthase | SAMN04488101_10873 | Not Available | Positive | 3666333 - 3667463 | 41308.5 |
| dethiobiotin synthetase | SAMN04488101_10874 | Not Available | Positive | 3667456 - 3668064 | 22144.8 |
| lsu ribosomal protein l20p | SAMN04488101_10875 | Not Available | Negative | 3668139 - 3668483 | 12980.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
