Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ymgg-like gly-zipper | SAMN04488101_10844 | Not Available | Negative | 3634100 - 3634651 | 19418.7 |
| cold shock protein (beta-ribbon, cspa family) | SAMN04488101_10845 | Not Available | Positive | 3634790 - 3634996 | 7365.59 |
| nucleoside-diphosphate-sugar epimerase | SAMN04488101_10846 | Not Available | Positive | 3635114 - 3635959 | 31578.6 |
| metallo-beta-lactamase family protein | SAMN04488101_10847 | Not Available | Positive | 3635962 - 3637347 | 52171.7 |
| ompa-ompf porin, oop family | SAMN04488101_10848 | Not Available | Positive | 3637570 - 3638886 | 47571.8 |
| tellurite resistance protein terc | SAMN04488101_10849 | Not Available | Negative | 3638959 - 3639951 | 36506.8 |
| helix-turn-helix domain-containing protein | SAMN04488101_10850 | Not Available | Negative | 3640026 - 3640598 | 21835.4 |
| drug resistance transporter, bcr/cfla subfamily | SAMN04488101_10851 | Not Available | Positive | 3640799 - 3641344 | 19252.4 |
| mfs transporter, dha1 family, bicyclomycin/chloramphenicol resistance protein | SAMN04488101_10852 | Not Available | Positive | 3641345 - 3641992 | 23212.7 |
| hypothetical protein | SAMN04488101_10853 | Not Available | Positive | 3642065 - 3643135 | 38077.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
