Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked outer membrane protein, susc/raga family | SAMN04488101_10834 | Not Available | Negative | 3621359 - 3624919 | 129235.0 |
| fecr family protein | SAMN04488101_10835 | Not Available | Negative | 3625115 - 3626224 | 41368.1 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488101_10836 | Not Available | Negative | 3626320 - 3626895 | 22280.2 |
| peptidase m60, enhancin and enhancin-like | SAMN04488101_10837 | Not Available | Positive | 3627382 - 3628866 | 54976.9 |
| hypothetical protein | SAMN04488101_10838 | Not Available | Positive | 3629014 - 3629400 | 14683.2 |
| predicted dna-binding protein, mmcq/yjbr family | SAMN04488101_10839 | Not Available | Negative | 3629548 - 3629889 | 12964.8 |
| hypothetical protein | SAMN04488101_10840 | Not Available | Positive | 3629947 - 3630681 | 28344.2 |
| nadp-dependent alcohol dehydrogenase | SAMN04488101_10841 | Not Available | Positive | 3630892 - 3632052 | 42365.0 |
| uncharacterized damage-inducible protein dinb (forms a four-helix bundle) | SAMN04488101_10842 | Not Available | Negative | 3632273 - 3632749 | 18663.3 |
| predicted arabinose efflux permease, mfs family | SAMN04488101_10843 | Not Available | Positive | 3632821 - 3634029 | 44852.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
