Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hth domain-containing protein | SAMN04488101_10824 | Not Available | Positive | 3610036 - 3610455 | 16307.0 |
| gliding motility-associated c-terminal domain-containing protein | SAMN04488101_10825 | Not Available | Negative | 3610733 - 3614116 | 120600.0 |
| protein of unknown function | SAMN04488101_10826 | Not Available | Negative | 3614205 - 3614528 | 12708.9 |
| hypothetical protein | SAMN04488101_10827 | Not Available | Positive | 3614799 - 3615227 | 16448.7 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN04488101_10828 | Not Available | Positive | 3615365 - 3615952 | 22313.1 |
| glyoxylase, beta-lactamase superfamily ii | SAMN04488101_10829 | Not Available | Positive | 3616045 - 3616713 | 24347.6 |
| disulphide bond corrector protein dsbc | SAMN04488101_10830 | Not Available | Negative | 3616714 - 3617205 | 18048.0 |
| hypothetical protein | SAMN04488101_10831 | Not Available | Negative | 3617229 - 3618737 | 56461.6 |
| thioredoxin | SAMN04488101_10832 | Not Available | Negative | 3618739 - 3619890 | 42530.0 |
| susd family protein | SAMN04488101_10833 | Not Available | Negative | 3619894 - 3621327 | 52977.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
