Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell division protein ftsq | SAMN04488101_107238 | Not Available | Negative | 3571400 - 3572284 | 33153.6 |
| udp-n-acetylmuramate--l-alanine ligase | SAMN04488101_107239 | Not Available | Negative | 3572277 - 3573632 | 49626.1 |
| udp-n-acetylglucosamine-n- acetylmuramylpentapeptide n-acetylglucosamine transferase | SAMN04488101_107240 | Not Available | Negative | 3573632 - 3574750 | 39906.1 |
| cell division protein ftsw | SAMN04488101_107241 | Not Available | Negative | 3574807 - 3575973 | 42254.4 |
| udp-n-acetylmuramoylalanine--d-glutamate ligase | SAMN04488101_107242 | Not Available | Negative | 3575976 - 3577319 | 49798.6 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | SAMN04488101_107243 | Not Available | Negative | 3577319 - 3578569 | 46350.0 |
| udp-n-acetylmuramoylalanyl-d-glutamate--2, 6-diaminopimelate ligase | SAMN04488101_107244 | Not Available | Negative | 3578569 - 3580023 | 53155.9 |
| cell division protein ftsi (penicillin-binding protein 3) | SAMN04488101_107245 | Not Available | Negative | 3580023 - 3582125 | 77263.0 |
| hypothetical protein | SAMN04488101_107246 | Not Available | Negative | 3582115 - 3582522 | 15677.1 |
| 16s rrna (cytosine1402-n4)-methyltransferase | SAMN04488101_107247 | Not Available | Negative | 3582519 - 3583424 | 33765.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
