Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488101_107228 | Not Available | Positive | 3559828 - 3560178 | 12931.7 |
| acyl-protein synthetase, luxe | SAMN04488101_107229 | Not Available | Positive | 3560206 - 3561189 | 36865.2 |
| tyrosyl-trna synthetase | SAMN04488101_107230 | Not Available | Negative | 3561283 - 3562569 | 47888.2 |
| protein of unknown function, duf479 | SAMN04488101_107231 | Not Available | Positive | 3562724 - 3563347 | 24249.0 |
| dna ligase (nad+) | SAMN04488101_107232 | Not Available | Positive | 3563369 - 3565381 | 75810.8 |
| 4-hydroxy-tetrahydrodipicolinate synthase | SAMN04488101_107233 | Not Available | Positive | 3565392 - 3566273 | 31778.1 |
| hypothetical protein | SAMN04488101_107234 | Not Available | Negative | 3566347 - 3566523 | 6481.81 |
| glycine c-acetyltransferase | SAMN04488101_107235 | Not Available | Negative | 3566785 - 3568026 | 46180.8 |
| cell division protein ftsz | SAMN04488101_107236 | Not Available | Negative | 3568196 - 3569830 | 59619.6 |
| cell division protein ftsa | SAMN04488101_107237 | Not Available | Negative | 3569960 - 3571321 | 49453.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
