Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488101_107218 | Not Available | Negative | 3541776 - 3542327 | 21623.4 |
| tetratricopeptide repeat-containing protein | SAMN04488101_107219 | Not Available | Negative | 3542419 - 3543168 | 28266.3 |
| rna polymerase sigma factor, sigma-70 family | SAMN04488101_107220 | Not Available | Negative | 3543168 - 3543737 | 21743.2 |
| hypothetical protein | SAMN04488101_107221 | Not Available | Positive | 3543894 - 3544886 | 34981.4 |
| hypothetical protein | SAMN04488101_107222 | Not Available | Positive | 3545010 - 3547094 | 77751.6 |
| tetratricopeptide repeat-containing protein | SAMN04488101_107223 | Not Available | Positive | 3547082 - 3549805 | 103452.0 |
| 1,4-alpha-glucan branching enzyme | SAMN04488101_107224 | Not Available | Negative | 3549780 - 3551690 | 74001.8 |
| alpha-glucosidase | SAMN04488101_107225 | Not Available | Negative | 3551690 - 3554158 | 95900.6 |
| tonb-dependent receptor plug domain | SAMN04488101_107226 | Not Available | Negative | 3554325 - 3557228 | 105741.0 |
| penicillin amidase | SAMN04488101_107227 | Not Available | Positive | 3557391 - 3559823 | 91447.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
