Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susd family protein | SAMN04488101_107208 | Not Available | Negative | 3528217 - 3529659 | 53533.5 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488101_107209 | Not Available | Negative | 3529672 - 3533394 | 137028.0 |
| fecr family protein | SAMN04488101_107210 | Not Available | Negative | 3533585 - 3534679 | 40529.3 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488101_107211 | Not Available | Negative | 3534766 - 3535329 | 22108.7 |
| hypothetical protein | SAMN04488101_107212 | Not Available | Positive | 3535350 - 3536321 | 37501.1 |
| peptidyl-dipeptidase dcp | SAMN04488101_107213 | Not Available | Positive | 3536391 - 3538541 | 80523.6 |
| hypothetical protein | SAMN04488101_107214 | Not Available | Negative | 3538582 - 3539037 | 15277.1 |
| hypothetical protein | SAMN04488101_107215 | Not Available | Negative | 3539056 - 3539994 | 34858.6 |
| ycei-like domain-containing protein | SAMN04488101_107216 | Not Available | Negative | 3540002 - 3540562 | 20595.3 |
| hypothetical protein | SAMN04488101_107217 | Not Available | Negative | 3540537 - 3541769 | 45274.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
