Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| starch synthase | SAMN04488101_107198 | Not Available | Negative | 3516392 - 3517819 | 54035.4 |
| sulfate adenylyltransferase subunit 1 | SAMN04488101_107199 | Not Available | Negative | 3518126 - 3519376 | 46650.7 |
| sulfate adenylyltransferase subunit 2 | SAMN04488101_107200 | Not Available | Negative | 3519414 - 3520319 | 34358.8 |
| phosphoadenosine phosphosulfate reductase | SAMN04488101_107201 | Not Available | Negative | 3520331 - 3521035 | 27331.6 |
| precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase | SAMN04488101_107202 | Not Available | Negative | 3521038 - 3521628 | 21615.4 |
| uroporphyrin-iii c-methyltransferase | SAMN04488101_107203 | Not Available | Negative | 3521633 - 3522418 | 28179.0 |
| sulfite reductase (ferredoxin) | SAMN04488101_107204 | Not Available | Negative | 3522415 - 3524508 | 78398.2 |
| protein of unknown function | SAMN04488101_107205 | Not Available | Positive | 3524865 - 3525566 | 26694.9 |
| thioredoxin | SAMN04488101_107206 | Not Available | Negative | 3525650 - 3527029 | 51618.9 |
| peroxiredoxin | SAMN04488101_107207 | Not Available | Negative | 3527047 - 3528174 | 41748.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
