Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heptosyltransferase-2 | SAMN04488101_107188 | Not Available | Positive | 3505769 - 3506749 | 36994.2 |
| phosphohistidine phosphatase | SAMN04488101_107189 | Not Available | Positive | 3506763 - 3507263 | 18772.2 |
| amp nucleosidase | SAMN04488101_107190 | Not Available | Negative | 3507260 - 3508120 | 31867.7 |
| atp-dependent clp protease atp-binding subunit clpx | SAMN04488101_107191 | Not Available | Negative | 3508249 - 3509490 | 45901.7 |
| atp-dependent clp protease, protease subunit | SAMN04488101_107192 | Not Available | Negative | 3509494 - 3510186 | 25593.8 |
| trigger factor | SAMN04488101_107193 | Not Available | Negative | 3510403 - 3511749 | 51159.0 |
| tat (twin-arginine translocation) pathway signal sequence | SAMN04488101_107194 | Not Available | Negative | 3512011 - 3513453 | 53310.2 |
| Trna-leu | Not Available | Not Available | Positive | 3513902 - 3513983 | Not Available |
| abc-type fe3+-hydroxamate transport system, substrate-binding protein | SAMN04488101_107196 | Not Available | Negative | 3514227 - 3515024 | 30437.9 |
| glucose-1-phosphate adenylyltransferase | SAMN04488101_107197 | Not Available | Negative | 3515109 - 3516380 | 46917.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
