Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two component transcriptional regulator, lyttr family | SAMN04488101_107168 | Not Available | Positive | 3485540 - 3486286 | 28285.5 |
| predicted nuclease of restriction endonuclease-like (recb) superfamily, duf1016 family | SAMN04488101_107169 | Not Available | Negative | 3486564 - 3487568 | 39237.8 |
| Trna-leu | Not Available | Not Available | Positive | 3487817 - 3487903 | Not Available |
| phosphoribosyl 1,2-cyclic phosphate phosphodiesterase | SAMN04488101_107171 | Not Available | Negative | 3487926 - 3488693 | 28692.4 |
| chaperone lola | SAMN04488101_107172 | Not Available | Negative | 3488733 - 3489395 | 25044.4 |
| dna segregation atpase ftsk/spoiiie, s-dna-t family | SAMN04488101_107173 | Not Available | Negative | 3489403 - 3492003 | 97442.9 |
| ankyrin repeat | SAMN04488101_107174 | Not Available | Positive | 3492172 - 3492816 | 22887.4 |
| phage shock protein c (pspc) family protein | SAMN04488101_107175 | Not Available | Negative | 3492817 - 3493038 | 8756.02 |
| protein of unknown function | SAMN04488101_107176 | Not Available | Negative | 3493040 - 3494320 | 49116.6 |
| permease of the drug/metabolite transporter (dmt) superfamily | SAMN04488101_107177 | Not Available | Negative | 3494360 - 3495262 | 33308.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
