Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488101_107158 | Not Available | Negative | 3473855 - 3478735 | 162173.0 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN04488101_107159 | Not Available | Positive | 3479217 - 3479783 | 21895.6 |
| putative nadph-quinone reductase (modulator of drug activity b) | SAMN04488101_107160 | Not Available | Positive | 3479848 - 3480444 | 22394.3 |
| hypothetical protein | SAMN04488101_107161 | Not Available | Positive | 3480549 - 3480725 | 6261.92 |
| uncharacterized conserved protein yndb, ahsa1/start domain | SAMN04488101_107162 | Not Available | Positive | 3480759 - 3481268 | 19314.9 |
| uncharacterized conserved protein phnb, glyoxalase superfamily | SAMN04488101_107163 | Not Available | Negative | 3481322 - 3481741 | 15835.0 |
| doxx-like family protein | SAMN04488101_107164 | Not Available | Negative | 3481746 - 3482135 | 14397.1 |
| uncharacterized conserved protein yndb, ahsa1/start domain | SAMN04488101_107165 | Not Available | Negative | 3482159 - 3482581 | 15793.2 |
| transcriptional regulator, arac family with amidase-like domain | SAMN04488101_107166 | Not Available | Positive | 3482721 - 3483698 | 37163.1 |
| histidine kinase-, dna gyrase b-, and hsp90-like atpase | SAMN04488101_107167 | Not Available | Positive | 3483922 - 3485535 | 61677.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
