Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peroxiredoxin | SAMN04488101_107148 | Not Available | Negative | 3459163 - 3460713 | 58975.2 |
| susd family protein | SAMN04488101_107149 | Not Available | Negative | 3460735 - 3462147 | 53055.8 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488101_107150 | Not Available | Negative | 3462159 - 3465482 | 123060.0 |
| fecr family protein | SAMN04488101_107151 | Not Available | Negative | 3465638 - 3466819 | 43877.2 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488101_107152 | Not Available | Negative | 3466900 - 3467484 | 22643.4 |
| protein of unknown function | SAMN04488101_107153 | Not Available | Positive | 3467667 - 3468224 | 20589.5 |
| chromate transporter | SAMN04488101_107154 | Not Available | Positive | 3468205 - 3469338 | 41020.8 |
| type ix secretion system membrane protein, porp/sprf family | SAMN04488101_107155 | Not Available | Negative | 3469360 - 3470277 | 34056.0 |
| gliding motility-associated c-terminal domain-containing protein | SAMN04488101_107156 | Not Available | Negative | 3470283 - 3471041 | 28203.6 |
| chaperone of endosialidase | SAMN04488101_107157 | Not Available | Negative | 3471055 - 3473811 | 96867.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
