Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susd family protein | SAMN04488101_107138 | Not Available | Negative | 3448106 - 3449536 | 53702.5 |
| thioredoxin-like | SAMN04488101_107139 | Not Available | Negative | 3449635 - 3451197 | 60510.1 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488101_107140 | Not Available | Negative | 3451209 - 3454403 | 117398.0 |
| fecr family protein | SAMN04488101_107141 | Not Available | Negative | 3454567 - 3455691 | 41565.5 |
| rna polymerase sigma-70 factor, bacteroides expansion family 1 | SAMN04488101_107142 | Not Available | Negative | 3455776 - 3456360 | 23111.1 |
| hypothetical protein | SAMN04488101_107143 | Not Available | Negative | 3456371 - 3456619 | 9183.96 |
| hypothetical protein | SAMN04488101_107144 | Not Available | Positive | 3457004 - 3457225 | 8104.66 |
| methylamine utilisation protein maue | SAMN04488101_107145 | Not Available | Positive | 3457244 - 3457711 | 17337.9 |
| hypothetical protein | SAMN04488101_107146 | Not Available | Positive | 3457791 - 3458015 | 7745.19 |
| hypothetical protein | SAMN04488101_107147 | Not Available | Positive | 3458085 - 3459149 | 40486.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
