Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susd family protein | SAMN04488101_107128 | Not Available | Negative | 3435125 - 3436684 | 58188.1 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488101_107129 | Not Available | Negative | 3436695 - 3440285 | 134684.0 |
| thiol-disulfide isomerase or thioredoxin | SAMN04488101_107130 | Not Available | Negative | 3440446 - 3441573 | 41534.2 |
| fecr family protein | SAMN04488101_107131 | Not Available | Negative | 3441626 - 3442840 | 45013.5 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488101_107132 | Not Available | Negative | 3442943 - 3443503 | 21518.1 |
| arac-type dna-binding protein | SAMN04488101_107133 | Not Available | Positive | 3444012 - 3444986 | 37427.2 |
| hypothetical protein | SAMN04488101_107134 | Not Available | Positive | 3445115 - 3445588 | 17945.3 |
| hypothetical protein | SAMN04488101_107135 | Not Available | Positive | 3445821 - 3446291 | 17798.4 |
| hypothetical protein | SAMN04488101_107136 | Not Available | Positive | 3446383 - 3446604 | 7599.87 |
| hypothetical protein | SAMN04488101_107137 | Not Available | Positive | 3447002 - 3448102 | 42287.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
