Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine kinase-, dna gyrase b-, and hsp90-like atpase | SAMN04488101_107118 | Not Available | Positive | 3421611 - 3423230 | 61123.2 |
| two component transcriptional regulator, lyttr family | SAMN04488101_107119 | Not Available | Positive | 3423234 - 3423986 | 28570.7 |
| restriction endonuclease | SAMN04488101_107120 | Not Available | Negative | 3423992 - 3424897 | 34194.2 |
| hypothetical protein | SAMN04488101_107121 | Not Available | Negative | 3424932 - 3425099 | 6306.62 |
| right handed beta helix region | SAMN04488101_107122 | Not Available | Negative | 3425354 - 3427162 | 67987.4 |
| hypothetical protein | SAMN04488101_107123 | Not Available | Negative | 3427291 - 3427770 | 17195.9 |
| starch-binding associating with outer membrane | SAMN04488101_107124 | Not Available | Negative | 3427786 - 3429672 | 70193.4 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488101_107125 | Not Available | Negative | 3429691 - 3433065 | 124214.0 |
| fecr family protein | SAMN04488101_107126 | Not Available | Negative | 3433218 - 3434267 | 40808.1 |
| sigma-70, region 4 | SAMN04488101_107127 | Not Available | Negative | 3434370 - 3434948 | 22440.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
