Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| leucyl/phenylalanyl-trna--protein transferase | SAMN04488101_107108 | Not Available | Positive | 3411572 - 3412354 | 29072.3 |
| tetratricopeptide repeat-containing protein | SAMN04488101_107109 | Not Available | Positive | 3412401 - 3413345 | 35978.2 |
| riboflavin synthase alpha chain | SAMN04488101_107110 | Not Available | Negative | 3413356 - 3413943 | 21457.5 |
| acetyl-coa carboxylase, biotin carboxylase subunit | SAMN04488101_107111 | Not Available | Negative | 3413954 - 3415438 | 54801.9 |
| l-threonine aldolase | SAMN04488101_107112 | Not Available | Negative | 3415453 - 3416487 | 36955.9 |
| badf-type atpase | SAMN04488101_107113 | Not Available | Positive | 3416812 - 3417678 | 32521.5 |
| 8-oxo-dgtp diphosphatase | SAMN04488101_107114 | Not Available | Negative | 3417759 - 3418502 | 29135.6 |
| 6-phosphofructokinase | SAMN04488101_107115 | Not Available | Positive | 3418566 - 3419552 | 35376.7 |
| badf-type atpase | SAMN04488101_107116 | Not Available | Positive | 3419563 - 3420405 | 31835.5 |
| glyceraldehyde 3-phosphate dehydrogenase | SAMN04488101_107117 | Not Available | Positive | 3420415 - 3421416 | 35734.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
