Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell wall-associated hydrolase, nlpc family | SAMN04488101_10798 | Not Available | Positive | 3400784 - 3401320 | 19865.0 |
| nadh-fmn oxidoreductase rutf, flavin reductase (dim6/ntab) family | SAMN04488101_10799 | Not Available | Negative | 3401337 - 3402224 | 32705.6 |
| fumarylacetoacetate (faa) hydrolase | SAMN04488101_107100 | Not Available | Negative | 3402227 - 3403222 | 36606.8 |
| anaerobic c4-dicarboxylate transporter dcua | SAMN04488101_107101 | Not Available | Negative | 3403301 - 3404635 | 47301.7 |
| homogentisate 1,2-dioxygenase | SAMN04488101_107102 | Not Available | Positive | 3405017 - 3406183 | 44794.1 |
| 4-hydroxyphenylpyruvate dioxygenase | SAMN04488101_107103 | Not Available | Positive | 3406391 - 3407521 | 42535.4 |
| membrane protein | SAMN04488101_107104 | Not Available | Positive | 3407648 - 3408565 | 34616.4 |
| hypothetical protein | SAMN04488101_107105 | Not Available | Negative | 3408578 - 3408850 | 10350.6 |
| outer membrane protein beta-barrel domain-containing protein | SAMN04488101_107106 | Not Available | Negative | 3408964 - 3409554 | 21015.2 |
| histidine kinase-, dna gyrase b-, and hsp90-like atpase | SAMN04488101_107107 | Not Available | Positive | 3409688 - 3411454 | 67749.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
