Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphate-selective porin o and p | SAMN04488101_10788 | Not Available | Negative | 3389944 - 3391059 | 42496.2 |
| hypothetical protein | SAMN04488101_10789 | Not Available | Negative | 3391368 - 3392036 | 25037.0 |
| hypothetical protein | SAMN04488101_10790 | Not Available | Negative | 3392041 - 3392424 | 13774.4 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488101_10791 | Not Available | Positive | 3392556 - 3393176 | 24325.6 |
| hypothetical protein | SAMN04488101_10792 | Not Available | Positive | 3393200 - 3393886 | 26004.1 |
| glutamate synthase domain-containing protein 2 | SAMN04488101_10793 | Not Available | Positive | 3394121 - 3395674 | 57004.9 |
| phosphoglycerol transferase mdob | SAMN04488101_10794 | Not Available | Positive | 3395729 - 3397657 | 73467.7 |
| gtra-like protein | SAMN04488101_10795 | Not Available | Positive | 3397661 - 3398146 | 18586.3 |
| phenylalanine-4-hydroxylase | SAMN04488101_10796 | Not Available | Positive | 3398231 - 3400015 | 67148.6 |
| short-chain dehydrogenase | SAMN04488101_10797 | Not Available | Positive | 3400079 - 3400780 | 25128.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
