Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl hydrolase family 20, domain 2 | SAMN04488101_10778 | Not Available | Negative | 3373618 - 3375573 | 73958.3 |
| n-acylglucosamine 2-epimerase | SAMN04488101_10779 | Not Available | Negative | 3375582 - 3376799 | 47317.9 |
| sialate o-acetylesterase | SAMN04488101_10780 | Not Available | Negative | 3376816 - 3378894 | 77473.0 |
| sialidase-1 | SAMN04488101_10781 | Not Available | Negative | 3378916 - 3380487 | 57236.7 |
| sugar phosphate permease | SAMN04488101_10782 | Not Available | Negative | 3380500 - 3381753 | 45835.8 |
| cyclically-permuted mutarotase family protein | SAMN04488101_10783 | Not Available | Negative | 3381769 - 3382935 | 42747.3 |
| n-acetylneuraminate lyase | SAMN04488101_10784 | Not Available | Negative | 3382940 - 3383878 | 34401.6 |
| susd family protein | SAMN04488101_10785 | Not Available | Negative | 3383955 - 3385532 | 59019.0 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488101_10786 | Not Available | Negative | 3385556 - 3388981 | 124683.0 |
| dna-binding transcriptional regulator, fadr family | SAMN04488101_10787 | Not Available | Positive | 3389166 - 3389867 | 26729.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
