Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zinc dependent phospholipase c | SAMN04488101_10768 | Not Available | Positive | 3362270 - 3363148 | 33801.4 |
| membrane-associated protein | SAMN04488101_10769 | Not Available | Negative | 3363117 - 3363818 | 26015.4 |
| protein of unknown function | SAMN04488101_10770 | Not Available | Negative | 3363922 - 3364629 | 24637.3 |
| dna polymerase iii, beta subunit | SAMN04488101_10771 | Not Available | Negative | 3364710 - 3365834 | 41302.3 |
| protein involved in gliding motility gldg | SAMN04488101_10772 | Not Available | Negative | 3365870 - 3367549 | 62561.7 |
| protein involved in gliding motility gldf | SAMN04488101_10773 | Not Available | Negative | 3367543 - 3368271 | 27182.8 |
| outer membrane protein beta-barrel domain-containing protein | SAMN04488101_10774 | Not Available | Negative | 3368591 - 3369109 | 18017.2 |
| abc-2 type transport system atp-binding protein | SAMN04488101_10775 | Not Available | Negative | 3369364 - 3370074 | 26099.0 |
| glycyl-trna synthetase | SAMN04488101_10776 | Not Available | Positive | 3370236 - 3371723 | 57671.6 |
| arylsulfatase a | SAMN04488101_10777 | Not Available | Negative | 3371974 - 3373521 | 58976.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
