Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN04488101_10758 | Not Available | Positive | 3353531 - 3354046 | 19284.9 |
| hypothetical protein | SAMN04488101_10759 | Not Available | Negative | 3354056 - 3354481 | 15148.3 |
| gliding motility-associated protein gldc | SAMN04488101_10760 | Not Available | Negative | 3354489 - 3354824 | 12953.5 |
| hypothetical protein | SAMN04488101_10761 | Not Available | Negative | 3354871 - 3355146 | 10132.3 |
| atp-dependent rna helicase rhle | SAMN04488101_10762 | Not Available | Negative | 3355153 - 3356481 | 49540.2 |
| dihydroorotase | SAMN04488101_10763 | Not Available | Positive | 3356732 - 3358066 | 49680.3 |
| protein of unknown function | SAMN04488101_10764 | Not Available | Positive | 3358066 - 3359139 | 41488.6 |
| conserved hypothetical protein (putative transposase or invertase) | SAMN04488101_10765 | Not Available | Negative | 3359149 - 3359667 | 20028.7 |
| hypothetical protein | SAMN04488101_10766 | Not Available | Negative | 3359715 - 3360092 | 14527.8 |
| molecular chaperone hsca | SAMN04488101_10767 | Not Available | Positive | 3360374 - 3362230 | 67625.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
