Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fes assembly protein iscx | SAMN04488101_10748 | Not Available | Negative | 3344138 - 3344380 | 9759.26 |
| ferredoxin, 2fe-2s | SAMN04488101_10749 | Not Available | Negative | 3344406 - 3344759 | 12983.6 |
| predicted oxidoreductase, contains short-chain dehydrogenase (sdr) and duf2520 domains | SAMN04488101_10750 | Not Available | Negative | 3344780 - 3345538 | 28076.1 |
| cytochrome c-type biogenesis protein ccmf | SAMN04488101_10751 | Not Available | Negative | 3345618 - 3348086 | 93003.7 |
| cytochrome c-type biogenesis protein ccme | SAMN04488101_10752 | Not Available | Negative | 3348092 - 3348523 | 16292.5 |
| glutamate dehydrogenase (nad(p)+) | SAMN04488101_10753 | Not Available | Negative | 3348704 - 3350125 | 51521.1 |
| hypothetical protein | SAMN04488101_10754 | Not Available | Negative | 3350275 - 3350493 | 8137.36 |
| heme exporter protein c | SAMN04488101_10755 | Not Available | Negative | 3350496 - 3351155 | 25059.8 |
| heme exporter protein b | SAMN04488101_10756 | Not Available | Negative | 3351240 - 3351899 | 24435.2 |
| chondroitinase b | SAMN04488101_10757 | Not Available | Negative | 3351915 - 3353297 | 49365.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
