Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| molecular chaperone grpe | SAMN04488101_10738 | Not Available | Negative | 3336237 - 3336842 | 22822.8 |
| cell division transport system atp-binding protein | SAMN04488101_10739 | Not Available | Negative | 3336971 - 3337654 | 25196.6 |
| hypothetical protein | SAMN04488101_10740 | Not Available | Negative | 3337657 - 3337860 | 7761.65 |
| gliding motility-associated c-terminal domain-containing protein | SAMN04488101_10741 | Not Available | Negative | 3337952 - 3339838 | 67914.2 |
| acyl-coa reductase (luxc) | SAMN04488101_10742 | Not Available | Negative | 3339953 - 3340972 | 38446.8 |
| 4fe-4s dicluster domain-containing protein | SAMN04488101_10743 | Not Available | Positive | 3341050 - 3341400 | 12717.5 |
| exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase | SAMN04488101_10744 | Not Available | Positive | 3341449 - 3342423 | 35667.9 |
| septum formation protein | SAMN04488101_10745 | Not Available | Negative | 3342412 - 3342981 | 21234.3 |
| hypothetical protein | SAMN04488101_10746 | Not Available | Negative | 3343080 - 3343490 | 15099.3 |
| 3-deoxy-d-manno-octulosonate 8-phosphate phosphatase (kdo 8-p phosphatase) | SAMN04488101_10747 | Not Available | Negative | 3343607 - 3344134 | 19244.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
