Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| core-2/i-branching enzyme | SAMN04488101_106255 | Not Available | Negative | 3294490 - 3295284 | 31073.2 |
| choline dehydrogenase | SAMN04488101_106256 | Not Available | Negative | 3295580 - 3297271 | 63592.2 |
| gluconate 2-dehydrogenase subunit 3 | SAMN04488101_106257 | Not Available | Negative | 3297277 - 3297852 | 21723.3 |
| transposase | SAMN04488101_1071 | Not Available | Negative | 3298349 - 3299413 | 40362.6 |
| hypothetical protein | SAMN04488101_1072 | Not Available | Negative | 3299502 - 3299912 | 15645.2 |
| transposase | SAMN04488101_1073 | Not Available | Positive | 3300003 - 3301046 | 39622.4 |
| hexosaminidase | SAMN04488101_1074 | Not Available | Positive | 3301389 - 3303593 | 83194.6 |
| fic/doc family protein | SAMN04488101_1075 | Not Available | Negative | 3303909 - 3304688 | 30211.9 |
| Trna-leu | Not Available | Not Available | Positive | 3304757 - 3304836 | Not Available |
| integral membrane protein | SAMN04488101_1077 | Not Available | Negative | 3304896 - 3305180 | 10879.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
