Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative membrane protein | SAMN04488101_106245 | Not Available | Negative | 3284450 - 3285310 | 32831.3 |
| kynureninase | SAMN04488101_106246 | Not Available | Negative | 3285318 - 3286610 | 48503.1 |
| gaf domain-containing protein | SAMN04488101_106247 | Not Available | Negative | 3286728 - 3287204 | 17417.8 |
| peptidase s46 | SAMN04488101_106248 | Not Available | Positive | 3287621 - 3289801 | 81614.1 |
| hypothetical protein | SAMN04488101_106249 | Not Available | Positive | 3289869 - 3290120 | 9627.54 |
| hypothetical protein | SAMN04488101_106250 | Not Available | Positive | 3290442 - 3291014 | 20662.1 |
| hypothetical protein | SAMN04488101_106251 | Not Available | Positive | 3291255 - 3291440 | 7184.61 |
| 4'-phosphopantetheinyl transferase | SAMN04488101_106252 | Not Available | Positive | 3291636 - 3292358 | 27622.1 |
| glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-n-acetylglucosamine synthase | SAMN04488101_106253 | Not Available | Negative | 3292372 - 3293538 | 44274.4 |
| hypothetical protein | SAMN04488101_106254 | Not Available | Negative | 3293545 - 3294456 | 34950.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
