Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488101_106235 | Not Available | Positive | 3274001 - 3274612 | 22874.3 |
| mfs transporter, nhs family, xanthosine permease | SAMN04488101_106236 | Not Available | Positive | 3274602 - 3275987 | 51937.0 |
| citrate synthase | SAMN04488101_106237 | Not Available | Negative | 3276076 - 3277362 | 48425.3 |
| protein of unknown function | SAMN04488101_106238 | Not Available | Negative | 3277479 - 3278009 | 19097.8 |
| trna dimethylallyltransferase | SAMN04488101_106239 | Not Available | Negative | 3278340 - 3279299 | 36273.8 |
| hypothetical protein | SAMN04488101_106240 | Not Available | Negative | 3279334 - 3280080 | 28140.2 |
| hypothetical protein | SAMN04488101_106241 | Not Available | Negative | 3280122 - 3280499 | 14491.6 |
| l-ascorbate metabolism protein ulag, beta-lactamase superfamily | SAMN04488101_106242 | Not Available | Negative | 3280548 - 3281630 | 40591.1 |
| dna topoisomerase-3 | SAMN04488101_106243 | Not Available | Negative | 3281647 - 3283548 | 70751.0 |
| acetoin utilization deacetylase acuc | SAMN04488101_106244 | Not Available | Negative | 3283545 - 3284450 | 33640.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
