Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent dna helicase recq | SAMN04488101_106225 | Not Available | Negative | 3262244 - 3264433 | 82042.5 |
| arabinose-5-phosphate isomerase | SAMN04488101_106226 | Not Available | Positive | 3264523 - 3265488 | 34479.2 |
| mannose-1-phosphate guanylyltransferase (gdp) | SAMN04488101_106227 | Not Available | Positive | 3265505 - 3266596 | 40869.0 |
| hypothetical chaperone protein | SAMN04488101_106228 | Not Available | Positive | 3266688 - 3267959 | 47783.0 |
| 23s rrna (guanosine2251-2'-o)-methyltransferase | SAMN04488101_106229 | Not Available | Negative | 3267981 - 3268745 | 27663.8 |
| replicative dna helicase | SAMN04488101_106230 | Not Available | Positive | 3268909 - 3270480 | 57851.2 |
| chromate transporter | SAMN04488101_106231 | Not Available | Negative | 3270485 - 3271669 | 42953.4 |
| tpr repeat-containing protein | SAMN04488101_106232 | Not Available | Negative | 3271698 - 3272033 | 12900.0 |
| electron transfer flavoprotein beta subunit | SAMN04488101_106233 | Not Available | Positive | 3272206 - 3272943 | 26405.7 |
| electron transfer flavoprotein alpha subunit apoprotein | SAMN04488101_106234 | Not Available | Positive | 3272958 - 3273929 | 33881.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
