Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488101_101252 | Not Available | Negative | 275776 - 276522 | 27509.9 |
| pas domain s-box-containing protein | SAMN04488101_101253 | Not Available | Negative | 276584 - 277888 | 50774.7 |
| protein of unknown function | SAMN04488101_101254 | Not Available | Positive | 278045 - 278560 | 18490.5 |
| Trna-arg | Not Available | Not Available | Positive | 278606 - 278680 | Not Available |
| hypothetical protein | SAMN04488101_101256 | Not Available | Negative | 280252 - 280425 | 6611.86 |
| t5orf172 domain-containing protein | SAMN04488101_101257 | Not Available | Positive | 280678 - 281295 | 24109.9 |
| ribosomal protein s18 acetylase rimi | SAMN04488101_101258 | Not Available | Negative | 281342 - 281785 | 16843.0 |
| quinol monooxygenase ygin | SAMN04488101_101259 | Not Available | Negative | 281851 - 282138 | 10657.2 |
| hypothetical protein | SAMN04488101_101260 | Not Available | Positive | 282155 - 282484 | 12478.0 |
| hypothetical protein | SAMN04488101_101261 | Not Available | Negative | 282606 - 282758 | 5870.28 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
