Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488101_106175 | Not Available | Negative | 3207288 - 3211133 | 147097.0 |
| putative restriction endonuclease | SAMN04488101_106176 | Not Available | Negative | 3211185 - 3212093 | 35360.1 |
| Trna-lys | Not Available | Not Available | Positive | 3212244 - 3212319 | Not Available |
| polysaccharide export outer membrane protein | SAMN04488101_106178 | Not Available | Positive | 3212692 - 3213441 | 27924.9 |
| capsular exopolysaccharide family | SAMN04488101_106179 | Not Available | Positive | 3213486 - 3215795 | 87476.1 |
| transcription antitermination factor nusg | SAMN04488101_106180 | Not Available | Positive | 3215917 - 3216468 | 21746.7 |
| membrane protein involved in the export of o-antigen and teichoic acid | SAMN04488101_106181 | Not Available | Positive | 3216465 - 3217907 | 54236.9 |
| dtdp-4-amino-4,6-dideoxygalactose transaminase | SAMN04488101_106182 | Not Available | Positive | 3217904 - 3219073 | 44073.9 |
| glycosyl transferase family 2 | SAMN04488101_106183 | Not Available | Positive | 3219078 - 3219935 | 33669.7 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN04488101_106184 | Not Available | Positive | 3219929 - 3221041 | 41966.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
