Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488101_106165 | Not Available | Negative | 3198255 - 3198899 | 24605.6 |
| protein of unknown function | SAMN04488101_106166 | Not Available | Negative | 3198997 - 3200397 | 53010.5 |
| glyoxalase superfamily enzyme, possibly 3-demethylubiquinone-9 3-methyltransferase | SAMN04488101_106167 | Not Available | Positive | 3200671 - 3201513 | 31541.7 |
| hypothetical protein | SAMN04488101_106168 | Not Available | Positive | 3201646 - 3201798 | 5367.12 |
| trna pseudouridine32 synthase / 23s rrna pseudouridine746 synthase | SAMN04488101_106169 | Not Available | Negative | 3201858 - 3202649 | 29655.2 |
| site-specific recombinase xerd | SAMN04488101_106170 | Not Available | Positive | 3202889 - 3204103 | 47077.6 |
| hypothetical protein | SAMN04488101_106171 | Not Available | Positive | 3204107 - 3204763 | 25677.2 |
| dna binding domain-containing protein, excisionase family | SAMN04488101_106172 | Not Available | Positive | 3204872 - 3205225 | 13414.6 |
| dna binding domain-containing protein, excisionase family | SAMN04488101_106173 | Not Available | Positive | 3205233 - 3205565 | 13340.9 |
| hypothetical protein | SAMN04488101_106174 | Not Available | Negative | 3205820 - 3206095 | 11031.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
