Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted phosphoribosyltransferase | SAMN04488101_106155 | Not Available | Positive | 3190569 - 3191183 | 22022.9 |
| hypothetical protein | SAMN04488101_106156 | Not Available | Negative | 3191173 - 3192267 | 41946.6 |
| ferritin-like metal-binding protein ycie | SAMN04488101_106157 | Not Available | Negative | 3192299 - 3192814 | 19564.6 |
| hypothetical protein | SAMN04488101_106158 | Not Available | Negative | 3192835 - 3193257 | 16805.0 |
| nucleotide-binding universal stress protein, uspa family | SAMN04488101_106159 | Not Available | Negative | 3193279 - 3194187 | 34428.1 |
| hypothetical protein | SAMN04488101_106160 | Not Available | Negative | 3194200 - 3194622 | 16738.1 |
| hypothetical protein | SAMN04488101_106161 | Not Available | Negative | 3194756 - 3195166 | 16147.4 |
| heat shock protein hsp20 | SAMN04488101_106162 | Not Available | Negative | 3195214 - 3195642 | 16115.1 |
| nucleotide-binding universal stress protein, uspa family | SAMN04488101_106163 | Not Available | Negative | 3195745 - 3196629 | 32769.0 |
| l,d-transpeptidase catalytic domain | SAMN04488101_106164 | Not Available | Negative | 3196666 - 3198123 | 55098.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
