Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fecr family protein | SAMN04488101_106145 | Not Available | Negative | 3178585 - 3179787 | 44206.5 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488101_106146 | Not Available | Positive | 3179997 - 3180599 | 23112.2 |
| succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase | SAMN04488101_106147 | Not Available | Positive | 3180657 - 3182030 | 49925.9 |
| metallo-beta-lactamase family protein | SAMN04488101_106148 | Not Available | Negative | 3182050 - 3183462 | 52650.5 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN04488101_106149 | Not Available | Positive | 3183699 - 3184748 | 39605.8 |
| phosphoenolpyruvate synthase | SAMN04488101_106150 | Not Available | Negative | 3184745 - 3187111 | 87628.2 |
| phospholipid/cholesterol/gamma-hch transport system substrate-binding protein | SAMN04488101_106151 | Not Available | Negative | 3187137 - 3188147 | 36943.9 |
| phospholipid/cholesterol/gamma-hch transport system atp-binding protein | SAMN04488101_106152 | Not Available | Negative | 3188147 - 3188923 | 28976.1 |
| phospholipid/cholesterol/gamma-hch transport system permease protein | SAMN04488101_106153 | Not Available | Negative | 3188930 - 3189712 | 28128.1 |
| hypothetical protein | SAMN04488101_106154 | Not Available | Positive | 3189894 - 3190544 | 24107.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
