Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chaperone of endosialidase | SAMN04488101_106135 | Not Available | Negative | 3166286 - 3166720 | 16060.7 |
| hypothetical protein | SAMN04488101_106136 | Not Available | Negative | 3166782 - 3167090 | 11311.5 |
| transcriptional attenuator, lytr family | SAMN04488101_106137 | Not Available | Negative | 3167260 - 3168234 | 35807.3 |
| polyketide cyclase / dehydrase and lipid transport | SAMN04488101_106138 | Not Available | Positive | 3168451 - 3168990 | 20266.7 |
| peroxiredoxin | SAMN04488101_106139 | Not Available | Negative | 3169040 - 3170104 | 38578.5 |
| peroxiredoxin | SAMN04488101_106140 | Not Available | Negative | 3170208 - 3171344 | 41732.1 |
| pkd-like family protein | SAMN04488101_106141 | Not Available | Negative | 3171361 - 3172842 | 54600.7 |
| protein of unknown function | SAMN04488101_106142 | Not Available | Negative | 3172854 - 3173576 | 27029.9 |
| susd family protein | SAMN04488101_106143 | Not Available | Negative | 3173588 - 3175009 | 53092.7 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488101_106144 | Not Available | Negative | 3175021 - 3178410 | 125804.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
