Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488101_106125 | Not Available | Negative | 3159919 - 3160596 | 25102.9 |
| hypothetical protein | SAMN04488101_106126 | Not Available | Negative | 3161002 - 3161775 | 27991.2 |
| activator of hsp90 atpase homolog 1-like protein | SAMN04488101_106127 | Not Available | Positive | 3162236 - 3162679 | 16506.2 |
| phnb protein | SAMN04488101_106128 | Not Available | Positive | 3162768 - 3163205 | 16028.0 |
| Trna-lys | Not Available | Not Available | Positive | 3163321 - 3163396 | Not Available |
| hypothetical protein | SAMN04488101_106130 | Not Available | Negative | 3163556 - 3164215 | 25935.4 |
| hypothetical protein | SAMN04488101_106131 | Not Available | Positive | 3164346 - 3164780 | 17118.0 |
| hypothetical protein | SAMN04488101_106132 | Not Available | Negative | 3164951 - 3165133 | 7144.63 |
| Trna-lys | Not Available | Not Available | Positive | 3165666 - 3165738 | Not Available |
| selenoprotein w-related protein | SAMN04488101_106134 | Not Available | Negative | 3165951 - 3166241 | 10801.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
