Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN04488101_10684 | Not Available | Negative | 3117527 - 3118108 | 22583.3 |
| dna repair protein radc | SAMN04488101_10685 | Not Available | Negative | 3118734 - 3119192 | 16895.6 |
| hypothetical protein | SAMN04488101_10686 | Not Available | Positive | 3119411 - 3120088 | 26100.6 |
| hypothetical protein | SAMN04488101_10687 | Not Available | Negative | 3120222 - 3120929 | 27418.4 |
| hypothetical protein | SAMN04488101_10688 | Not Available | Negative | 3120922 - 3121512 | 23278.3 |
| hypothetical protein | SAMN04488101_10689 | Not Available | Negative | 3121512 - 3121997 | 18672.0 |
| hypothetical protein | SAMN04488101_10690 | Not Available | Negative | 3122080 - 3123381 | 50248.5 |
| hypothetical protein | SAMN04488101_10691 | Not Available | Negative | 3123485 - 3123721 | 9595.51 |
| hypothetical protein | SAMN04488101_10692 | Not Available | Negative | 3123749 - 3124345 | 22280.7 |
| hypothetical protein | SAMN04488101_10693 | Not Available | Negative | 3124548 - 3124748 | 6995.91 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
