Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase family m28 | SAMN04488101_10664 | Not Available | Positive | 3094159 - 3095124 | 34878.4 |
| hypothetical protein | SAMN04488101_10665 | Not Available | Negative | 3095128 - 3096141 | 38634.3 |
| kdo2-lipid iv(a) lauroyltransferase | SAMN04488101_10666 | Not Available | Negative | 3096141 - 3097022 | 34598.2 |
| wbqc-like protein family protein | SAMN04488101_10667 | Not Available | Positive | 3097061 - 3097672 | 24464.0 |
| magnesium transporter | SAMN04488101_10668 | Not Available | Positive | 3097676 - 3098794 | 43557.6 |
| magnesium transporter | SAMN04488101_10669 | Not Available | Positive | 3098823 - 3100172 | 49816.9 |
| biotin synthase | SAMN04488101_10670 | Not Available | Positive | 3100185 - 3101192 | 37184.6 |
| tigr01666 family membrane protein | SAMN04488101_10671 | Not Available | Negative | 3101195 - 3103354 | 82470.3 |
| hypothetical protein | SAMN04488101_10672 | Not Available | Negative | 3103573 - 3104730 | 43163.4 |
| tetratricopeptide repeat-containing protein | SAMN04488101_10673 | Not Available | Negative | 3104806 - 3105882 | 40108.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
