Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN04488101_10654 | Not Available | Negative | 3083474 - 3085597 | 76212.3 |
| heparan-sulfate lyase | SAMN04488101_10655 | Not Available | Negative | 3085609 - 3087678 | 78733.6 |
| hypothetical protein | SAMN04488101_10656 | Not Available | Negative | 3088014 - 3088337 | 11990.8 |
| uridine phosphorylase | SAMN04488101_10657 | Not Available | Negative | 3088449 - 3089315 | 31805.4 |
| uncharacterized protein, yigz family | SAMN04488101_10658 | Not Available | Negative | 3089366 - 3089980 | 22856.7 |
| hypothetical protein | SAMN04488101_10659 | Not Available | Negative | 3089986 - 3090840 | 31873.8 |
| diaminohydroxyphosphoribosylaminopyrimidine deaminase | SAMN04488101_10660 | Not Available | Negative | 3090837 - 3091889 | 39513.6 |
| release factor glutamine methyltransferase | SAMN04488101_10661 | Not Available | Positive | 3091929 - 3092792 | 32151.7 |
| integrase/recombinase xerd | SAMN04488101_10662 | Not Available | Negative | 3092789 - 3093688 | 34140.3 |
| 3-dehydroquinate dehydratase | SAMN04488101_10663 | Not Available | Positive | 3093731 - 3094153 | 15458.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
