Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| penicillin-binding protein 1c | SAMN04488101_10644 | Not Available | Negative | 3063555 - 3065954 | 90149.1 |
| hypothetical protein | SAMN04488101_10645 | Not Available | Negative | 3065954 - 3071533 | 206802.0 |
| hypothetical protein | SAMN04488101_10646 | Not Available | Negative | 3071615 - 3072019 | 15052.5 |
| dna topoisomerase i | SAMN04488101_10647 | Not Available | Negative | 3072115 - 3074697 | 96416.7 |
| glutathione peroxidase | SAMN04488101_10648 | Not Available | Positive | 3075141 - 3075653 | 19247.3 |
| 5'-nucleotidase, c-terminal domain | SAMN04488101_10649 | Not Available | Positive | 3075657 - 3076418 | 27730.6 |
| 5'-nucleotidase | SAMN04488101_10650 | Not Available | Positive | 3076396 - 3077346 | 34679.8 |
| trna (5-methylaminomethyl-2-thiouridylate)-methyltransferase | SAMN04488101_10651 | Not Available | Negative | 3077352 - 3078479 | 41798.9 |
| starch-binding associating with outer membrane | SAMN04488101_10652 | Not Available | Negative | 3078607 - 3080298 | 63654.2 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488101_10653 | Not Available | Negative | 3080316 - 3083453 | 115076.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
