Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter, acs family, hexuronate transporter | SAMN04488101_10624 | Not Available | Negative | 3039472 - 3040755 | 47282.6 |
| acetyl esterase/lipase | SAMN04488101_10625 | Not Available | Negative | 3040752 - 3041633 | 31921.6 |
| cupin domain-containing protein | SAMN04488101_10626 | Not Available | Negative | 3041652 - 3041993 | 12942.4 |
| alginate lyase | SAMN04488101_10627 | Not Available | Negative | 3042000 - 3044111 | 79168.5 |
| transcriptional regulator, gntr family | SAMN04488101_10628 | Not Available | Negative | 3044172 - 3045020 | 32103.8 |
| predicted arabinose efflux permease, mfs family | SAMN04488101_10629 | Not Available | Positive | 3045301 - 3046371 | 38434.0 |
| protein of unknown function | SAMN04488101_10630 | Not Available | Positive | 3046550 - 3047983 | 51910.7 |
| cytochrome c551/c552 | SAMN04488101_10631 | Not Available | Positive | 3048027 - 3049946 | 71260.0 |
| solute:na+ symporter, sss family | SAMN04488101_10632 | Not Available | Positive | 3050065 - 3051750 | 60827.1 |
| predicted dehydrogenase | SAMN04488101_10633 | Not Available | Negative | 3051896 - 3053254 | 51020.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
