Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488101_10614 | Not Available | Negative | 3023187 - 3024056 | 33006.8 |
| thioredoxin-like | SAMN04488101_10615 | Not Available | Positive | 3024255 - 3024830 | 21092.6 |
| alginate lyase | SAMN04488101_10616 | Not Available | Negative | 3024835 - 3025608 | 28882.3 |
| poly(beta-d-mannuronate) lyase | SAMN04488101_10617 | Not Available | Negative | 3025618 - 3027939 | 85177.5 |
| hypothetical protein | SAMN04488101_10618 | Not Available | Negative | 3027939 - 3029216 | 46802.4 |
| ragb/susd domain-containing protein | SAMN04488101_10619 | Not Available | Negative | 3029234 - 3030835 | 58892.1 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488101_10620 | Not Available | Negative | 3030839 - 3034042 | 117678.0 |
| starch-binding associating with outer membrane | SAMN04488101_10621 | Not Available | Negative | 3034091 - 3035485 | 52300.3 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488101_10622 | Not Available | Negative | 3035496 - 3038543 | 110358.0 |
| 3-oxoacyl-[acyl-carrier protein] reductase | SAMN04488101_10623 | Not Available | Negative | 3038705 - 3039457 | 26317.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
